PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023918017.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GRF

Protein Properties

Length: 237aa MW: 25897.2 Da PI: 9.7277

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023918017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.6	1e-23	136	180	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+e grCrRtDGKkWRCs++v++ kk+CErH++rgr+rsrk +e+ XP_023918017.1 136 DPEAGRCRRTDGKKWRCSKEVVPHKKYCERHMQRGRQRSRKLVEP 180 79***************************************9986 PP
2	QLQ	45.7	2e-16	65	99	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT Qlq+L Q+l+yKy+ a++PvP++Ll++i+k XP_023918017.1 65 FTIFQLQELQLQALIYKYIEAGLPVPHHLLLPIWK 99 7888******************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MEHRTPPPKI ARFTNTVGIG PTSCDNSWDM NTIGFGSNGA DGSTPVGLNL ELGRGSGHST 60 KSRVFTIFQL QELQLQALIY KYIEAGLPVP HHLLLPIWKS VANVFGGLND GVPLGYTSFL 120 GPSPLSWDHR MGMDPDPEAG RCRRTDGKKW RCSKEVVPHK KYCERHMQRG RQRSRKLVEP 180 AQPTTWDASS SNTNLSISLS VNSSGSSSSS SSSFSPRLGF SPESVIHGGR YSENIAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	4e-31	GRF family protein