PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023918018.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GRF

Protein Properties

Length: 236aa MW: 25798 Da PI: 9.7277

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023918018.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.6	1e-23	135	179	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+e grCrRtDGKkWRCs++v++ kk+CErH++rgr+rsrk +e+ XP_023918018.1 135 DPEAGRCRRTDGKKWRCSKEVVPHKKYCERHMQRGRQRSRKLVEP 179 79***************************************9986 PP
2	QLQ	45.7	2e-16	64	98	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT Qlq+L Q+l+yKy+ a++PvP++Ll++i+k XP_023918018.1 64 FTIFQLQELQLQALIYKYIEAGLPVPHHLLLPIWK 98 7888******************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MEHRTPPPKI ARFTNTGIGP TSCDNSWDMN TIGFGSNGAD GSTPVGLNLE LGRGSGHSTK 60 SRVFTIFQLQ ELQLQALIYK YIEAGLPVPH HLLLPIWKSV ANVFGGLNDG VPLGYTSFLG 120 PSPLSWDHRM GMDPDPEAGR CRRTDGKKWR CSKEVVPHKK YCERHMQRGR QRSRKLVEPA 180 QPTTWDASSS NTNLSISLSV NSSGSSSSSS SSFSPRLGFS PESVIHGGRY SENIAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	4e-31	GRF family protein