PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023918105.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 525aa MW: 58551.7 Da PI: 4.0907

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023918105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.5	5.3e-07	264	312	2	47
SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 ++W++eE++l+ + v + Wk ++ ++ Rt k+++s+++++ XP_023918105.1 264 QKWSEEEEDLFNEIVFSNPASlhknFWKNLPSAFP-SRTKKEIVSYYFNV 312 79***********9999999999******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MVQKRRFDDD DDEIFEVSSK LPRQLEDNNQ LVSFSESVFP GNASQFPQTV EGGFLKGNIE 60 VDEKLSDIFT DLPRSSEDNE AIVPASTSIS SWATSSTSEE DFRSEAPVHV SFFPEFFYAE 120 RPTKTLTHCD DAYSILFDHP PRKPVPTGPN HQADIPAWSS QDTKSTSTHL GTPEAVSDSD 180 LTVRDEDEKR LMGTCVIPMP DLDLSVCNGD NVGNGRIDCS CEDGGSVRCV RQHITEARYN 240 LMKNVGQEIL VELGFSDMGE HVAQKWSEEE EDLFNEIVFS NPASLHKNFW KNLPSAFPSR 300 TKKEIVSYYF NVFMLQRRAE QNRCNPMNID SDNDEWHGSD DYSDNEHVVT EEDEDSAVES 360 PLCHDNPVYD RIREDDLQEY DEDCAHGTCD DDKKANVVSG EGVTNISETN PNKLLDNCGS 420 SPTVQLQDKT SWDERGDEEV QDDSCLSSDT GVASQGIQAK SENGSHWSSG GSVNGLSSGV 480 GHEYIMEPCD NKVWDAGFMT CPKNKVDLLP TCSMIEEIFG DGSWK

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MVQKRRFDDD DDEIFEVSSK LPRQLEDNNQ LVSFSESVFP GNASQFPQTV EGGFLKGNIE  60
VDEKLSDIFT DLPRSSEDNE AIVPASTSIS SWATSSTSEE DFRSEAPVHV SFFPEFFYAE  120
RPTKTLTHCD DAYSILFDHP PRKPVPTGPN HQADIPAWSS QDTKSTSTHL GTPEAVSDSD  180
LTVRDEDEKR LMGTCVIPMP DLDLSVCNGD NVGNGRIDCS CEDGGSVRCV RQHITEARYN  240
LMKNVGQEIL VELGFSDMGE HVAQKWSEEE EDLFNEIVFS NPASLHKNFW KNLPSAFPSR  300
TKKEIVSYYF NVFMLQRRAE QNRCNPMNID SDNDEWHGSD DYSDNEHVVT EEDEDSAVES  360
PLCHDNPVYD RIREDDLQEY DEDCAHGTCD DDKKANVVSG EGVTNISETN PNKLLDNCGS  420
SPTVQLQDKT SWDERGDEEV QDDSCLSSDT GVASQGIQAK SENGSHWSSG GSVNGLSSGV  480
GHEYIMEPCD NKVWDAGFMT CPKNKVDLLP TCSMIEEIFG DGSWK