PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918121.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 321aa    MW: 35065.1 Da    PI: 5.3812
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918121.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.30.000641872231455
                     HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_023918121.1 187 EKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 223
                     56678888888888887.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MNRGVLQSAP VQQMMAGNPN CWNINNMRPP TQPASPFLPS PIFFPQYAPT SSSSSSSSIP  60
SWHDSQELPE SWSQLLLGGL VGEEDKDGMS QFQAAKKLEN WGEQLYSQAA NASVVSVKQE  120
NSVSNYVYGH GTEDFQPAKA TWSQVMPASS PNSSCVTSFN NNMLDFSSIK VDGRHPPPDR  180
SSEVRKEKLG DRITALHQLV SPFGKTDTAS VLLEAIGYIR FLQSQIEALS LPYLGSGSGN  240
MRQQQQSVQG ERNCLFPEDP GQLLNENCIK RKGGPEQDSH EEPKKDLRSR GLCLVPVSCT  300
LQVGNDNGAD YWAPALGGGF R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-90bHLH family protein