PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918232.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 345aa    MW: 38979.9 Da    PI: 6.3576
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918232.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.3e-12169215455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h ++ErrRR+++ ++f  L  ++P +     kK++Ka++L +A++Y+k+Lq
  XP_023918232.1 169 DHIIAERRRREKLGERFIALSAIVPGL-----KKMDKASVLAEAINYVKELQ 215
                     699************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MDEYNYIHQS HMNTLDGFTT HDMATAMVEN FQQSLSSESY SSYPTFTEKA TTTLSNTSAE  60
TYQRPAKQPK TNSWDSCITD HVSPKPSSSS HILSFENSIS MLTNPQEFYG SHDSSLKLNN  120
EMVSQANIHF PPLISKDSFE NQDYAPKASL QGIKRTYSSM TRNPSNAQDH IIAERRRREK  180
LGERFIALSA IVPGLKKMDK ASVLAEAINY VKELQERIKL FEEQTKKRTV ESVVFVKKSQ  240
LSADDDTSSC NENSDNYSDE ALLEIEARIS EKDVLIRIHC EKQKGAIVKI LSEIEKLHLI  300
VVNSSVLPFG NSTFDITIIA QKGNEFNMTT KDLVKTLRVA LLKEM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174179ERRRRE
2175180RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-71bHLH family protein