PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023918465.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CAMTA

Protein Properties

Length: 995aa MW: 111225 Da PI: 5.3217

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023918465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.4	8.7e-56	16	128	5	117
CG-1 5 kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 +rwlk+ e++ iL+n+ek++lt+e++++p+sgsl+L+n++++r+fr+DG++w+kkkdg+tv E+he+LKvg+ve+l+cyYah+e+np+fqrr+y XP_023918465.1 16 LTRWLKPAEVLFILQNHEKYQLTEEPPQQPTSGSLFLFNKRVLRFFRRDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPSFQRRSY 110 68******************************************************************************************* PP CG-1 100 wlLeeelekivlvhylev 117 w+L+ ++e+ivlvhy+e+ XP_023918465.1 111 WMLDPAYEHIVLVHYRET 128 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 995 aa Download sequence
MMQSGYDING LFREALTRWL KPAEVLFILQ NHEKYQLTEE PPQQPTSGSL FLFNKRVLRF 60 FRRDGHNWRK KKDGRTVGEA HERLKVGNVE ALNCYYAHGE QNPSFQRRSY WMLDPAYEHI 120 VLVHYRETNE GKATSGSVTL LSPGSPSTFS QSPCSYTKNP GSNSIISDFF DPYQSLSSPE 180 VSSEIAIKNN GMDHLDRVDR REQRESSPEL EVTQALRRLE EQLSLNEDSV KYISTFYSQD 240 ENSNDSDILQ YERENAKQDQ CAALLHGPEH IGQFCGGHVV IQDSNNLEFL SAAGDSGKNH 300 NQSFGHDFTD GSKGSLSWTE MFGSYNTSSG VESQSENLYI LDGNGKPPSS GKAPKEEQEH 360 GHWLNFDVDN FENTSMSLAE EADRFKFPAY SSEIESHGTN SNYYMTFFDQ DQTGIPLEAD 420 SSLTVSQKQK FTIREISPEW GYANEATKVF IIGSFLCDPL ESAWTCMFGD LEASIQIIQE 480 GVICCEAPPH LPGKVTLCIT SGNRESCSEV REFEYRSKTS ACAHCNSPNT EAAKSPEELL 540 LLVRFVQMLL FESLMQKGDT VESEIQLLRR SKADDDSWGH VIEALLVGSG TSSSMIDWIL 600 QELLKDKLCQ WLSSISQEGP DQTGCSLSKK EQGIIHMVAG LGFEWALNPI LNYGVNINFR 660 DINGWTALHW AARFGREKMV AALIASGASA GAVTDPNSQD PRGKTPASIA ATNGHKGLAG 720 YLSEVALTSH LSSLTLEESE LSKGSAEVEA EITVNSISKG SLALSEDQIT LKDTLAAVRN 780 AAQAAARIQS AFRAHSFRKR IQRQDSSAAS IDDYGINSDD ISALSRLAFR NPRVYNSAAL 840 SIQKKYRGWK SRKDFLAFRQ KIVKIQAHVR GYQVRKHYKE ICWAVGILDK VVLRWRRKGV 900 GLRGFRNDTQ VIDETGDEDI LKVFRKQKVD VAIEEAVSRV LSMVDSPEAR QQYHRVLEIY 960 RQAKAELDGM DSEGVGSTSL GDVFGMEDED LYQFP

Sequence ? help Back to Top

Protein Sequence Length: 995 aa Download sequence

MMQSGYDING LFREALTRWL KPAEVLFILQ NHEKYQLTEE PPQQPTSGSL FLFNKRVLRF  60
FRRDGHNWRK KKDGRTVGEA HERLKVGNVE ALNCYYAHGE QNPSFQRRSY WMLDPAYEHI  120
VLVHYRETNE GKATSGSVTL LSPGSPSTFS QSPCSYTKNP GSNSIISDFF DPYQSLSSPE  180
VSSEIAIKNN GMDHLDRVDR REQRESSPEL EVTQALRRLE EQLSLNEDSV KYISTFYSQD  240
ENSNDSDILQ YERENAKQDQ CAALLHGPEH IGQFCGGHVV IQDSNNLEFL SAAGDSGKNH  300
NQSFGHDFTD GSKGSLSWTE MFGSYNTSSG VESQSENLYI LDGNGKPPSS GKAPKEEQEH  360
GHWLNFDVDN FENTSMSLAE EADRFKFPAY SSEIESHGTN SNYYMTFFDQ DQTGIPLEAD  420
SSLTVSQKQK FTIREISPEW GYANEATKVF IIGSFLCDPL ESAWTCMFGD LEASIQIIQE  480
GVICCEAPPH LPGKVTLCIT SGNRESCSEV REFEYRSKTS ACAHCNSPNT EAAKSPEELL  540
LLVRFVQMLL FESLMQKGDT VESEIQLLRR SKADDDSWGH VIEALLVGSG TSSSMIDWIL  600
QELLKDKLCQ WLSSISQEGP DQTGCSLSKK EQGIIHMVAG LGFEWALNPI LNYGVNINFR  660
DINGWTALHW AARFGREKMV AALIASGASA GAVTDPNSQD PRGKTPASIA ATNGHKGLAG  720
YLSEVALTSH LSSLTLEESE LSKGSAEVEA EITVNSISKG SLALSEDQIT LKDTLAAVRN  780
AAQAAARIQS AFRAHSFRKR IQRQDSSAAS IDDYGINSDD ISALSRLAFR NPRVYNSAAL  840
SIQKKYRGWK SRKDFLAFRQ KIVKIQAHVR GYQVRKHYKE ICWAVGILDK VVLRWRRKGV  900
GLRGFRNDTQ VIDETGDEDI LKVFRKQKVD VAIEEAVSRV LSMVDSPEAR QQYHRVLEIY  960
RQAKAELDGM DSEGVGSTSL GDVFGMEDED LYQFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein