PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023918475.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 361aa MW: 41273.2 Da PI: 8.1076

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023918475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.9	7.1e-18	62	157	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +Y++YAke GF v k++skk ++g + t C gk++ + + +++ + +++t+t+Cka+l++++ +gkw + +++l+HnH l XP_023918475.1 62 YYRRYAKEKGFAVAKRTSKKG-NDGAVRYVTIACCYAGKPRIRLNCpgikrtrSTNPVQLKPQTKTDCKAQLRLSLCPNGKWILRSMVLDHNHGL 155 8*************99887.9999***********998888988777777778999******************************9 PP FAR1 90 ap 91 +p XP_023918475.1 156 SP 157 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MVEGDSNEDI ENDMVEVESN EDNIENEIVE LNEMVETKGV ENKAKDPKLG MMFDSIDDVV 60 IYYRRYAKEK GFAVAKRTSK KGNDGAVRYV TIACCYAGKP RIRLNCPGIK RTRSTNPVQL 120 KPQTKTDCKA QLRLSLCPNG KWILRSMVLD HNHGLSPSKT RFYKCNSIIE PHVKKKLELH 180 DKAGIRMNKS FNSFVVAAGG HENLSFLEKD CRNHMEKVRR SHLREGDASA MHHYFLKMQA 240 DNSEFFYAMD FDDDGRLKNV FWADARSRAA FKEFGDVVTF DTTYMVNKYE MPFAPFVGVN 300 HHGQSTLLGC GLILREDTNS FIWLFKSWLA CMSECPPNAI ITDQDKAMKK AIEIVFPNAR 360 H

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MVEGDSNEDI ENDMVEVESN EDNIENEIVE LNEMVETKGV ENKAKDPKLG MMFDSIDDVV  60
IYYRRYAKEK GFAVAKRTSK KGNDGAVRYV TIACCYAGKP RIRLNCPGIK RTRSTNPVQL  120
KPQTKTDCKA QLRLSLCPNG KWILRSMVLD HNHGLSPSKT RFYKCNSIIE PHVKKKLELH  180
DKAGIRMNKS FNSFVVAAGG HENLSFLEKD CRNHMEKVRR SHLREGDASA MHHYFLKMQA  240
DNSEFFYAMD FDDDGRLKNV FWADARSRAA FKEFGDVVTF DTTYMVNKYE MPFAPFVGVN  300
HHGQSTLLGC GLILREDTNS FIWLFKSWLA CMSECPPNAI ITDQDKAMKK AIEIVFPNAR  360
H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	4e-67	FAR1 family protein