PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918479.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 353aa    MW: 40817.4 Da    PI: 7.4088
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.71.5e-2630117289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     fYneY++++GFs+rk++ +k k++g +t+r+fvC keg r ++k++ ++ +++raetr+gC+a+l++ +++ ++k++v+++  eHnH l
  XP_023918479.1  30 FYNEYGRKTGFSIRKEYVNKCKKTGVVTSRRFVCAKEGVRGKDKRD-QNVKNPRAETRCGCEARLVIILNRdSKKYVVSEFIAEHNHYL 117
                     9******************************************999.999*****************999989**************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MGIHVPSNVP MESTPFKGME FEADEIAYGF YNEYGRKTGF SIRKEYVNKC KKTGVVTSRR  60
FVCAKEGVRG KDKRDQNVKN PRAETRCGCE ARLVIILNRD SKKYVVSEFI AEHNHYLHLP  120
STVHMMPSQR KVDATHAIEI DLAHESGLRL KQSYELLSKQ VGGYDNLGFT KQDYKNYLRT  180
KRQRDMEHGA AASLGRYFSR QLKENPSYYF ATQLDCEELI TNIFWADARM IIDYSHFDDV  240
ITFNTTYSTN RDARPLGVFL GLNHHRETVV FGGALLYDET IESFVWLFET FLEAMSEKKP  300
ITIFTDQDAA MSVAIKVVMP ETYHALCSWH MWQNAEKHLG YLLKTEPQFN ADF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-86FAR1 family protein