PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023918547.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 356aa MW: 41073.5 Da PI: 6.3966

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023918547.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64	4.1e-20	98	186	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYneYA+++GFsv+k+ k+ + +i++rtf Cskeg+r +k++ e+++ +r+ +r+gC a+++ +++kd+ +v +++ + nHe+ap XP_023918547.1 98 EFYNEYAHRIGFSVQKHFVKRG-NMVQIIRRTFSCSKEGERGVDKRR-ENASYRRPISRIGCLAQMTCHLQKDAMLHVVSFHDQRNHEFAP 186 6***********99988887.6666************9999.99999*********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MDTSQIILLE AELNDCIADQ QEEAQIEPTH ASPKNSNTPS RHSKKIVEVL EIVLEDEFIG 60 WIADQQEETK VERTLGSPNK SNTPAIGMKF DCDESAYEFY NEYAHRIGFS VQKHFVKRGN 120 MVQIIRRTFS CSKEGERGVD KRRENASYRR PISRIGCLAQ MTCHLQKDAM LHVVSFHDQR 180 NHEFAPSPMK NMLRLKRKIS YAQKAIANDA ERSGISIKQT IELLSMQVGD RENLGFMDVD 240 YKNHVHNERR MALRKGDGPS MMEYFRGIYD HPFAPFVGVN HHKQLIIFGT ALLYDETIES 300 FKWLFETFLT AMSGKQPRTI LTDQSATMAK AITKHFANDF SDCLYEYEDE DEWLVS

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MDTSQIILLE AELNDCIADQ QEEAQIEPTH ASPKNSNTPS RHSKKIVEVL EIVLEDEFIG  60
WIADQQEETK VERTLGSPNK SNTPAIGMKF DCDESAYEFY NEYAHRIGFS VQKHFVKRGN  120
MVQIIRRTFS CSKEGERGVD KRRENASYRR PISRIGCLAQ MTCHLQKDAM LHVVSFHDQR  180
NHEFAPSPMK NMLRLKRKIS YAQKAIANDA ERSGISIKQT IELLSMQVGD RENLGFMDVD  240
YKNHVHNERR MALRKGDGPS MMEYFRGIYD HPFAPFVGVN HHKQLIIFGT ALLYDETIES  300
FKWLFETFLT AMSGKQPRTI LTDQSATMAK AITKHFANDF SDCLYEYEDE DEWLVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-40	FAR1 family protein