PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918624.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 234aa    MW: 26959 Da    PI: 8.0567
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR188.78.2e-2864155289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +Y++YAk++GF +r+ + ++s r+g++++r+f C+keg+r +++k+    + + r++r+ tr gCka+++v+kek+gkw+vtkle++HnH++
  XP_023918624.1  64 YYDAYAKRLGFIIRVGNCHRSGREGSVISRRFLCNKEGFRVNNNKTrntrSLEVRKPRQITREGCKAMIMVRKEKTGKWVVTKLETKHNHPM 155
                     8***************************************9999997776667789**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MMELDVDLGS KIVECSIGRE ICVTEAGEML DLYEGRELGI HEIDINVQPY VEMEFESEEA  60
AMMYYDAYAK RLGFIIRVGN CHRSGREGSV ISRRFLCNKE GFRVNNNKTR NTRSLEVRKP  120
RQITREGCKA MIMVRKEKTG KWVVTKLETK HNHPMGISVG KGRRCTVQAR PQDEKDKKIR  180
ELSTELGRAN QQIAQCEEQL KIILKYIEQH ANHLTKSVQE IVENVKEVEA MGQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.14e-44FAR1 family protein