PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918637.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 192aa    MW: 22056.4 Da    PI: 8.5754
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918637.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR189.45.1e-2879170289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +Y++YAk++GF +r+ + ++s r+g++++r+f C+keg+r +++k+    + + r++r+ tr gCka+++v+kek+gkw+vtkle++HnH++
  XP_023918637.1  79 YYDAYAKRLGFIIRVGNCHRSGREGSVISRRFLCNKEGFRVNNNKTrntrSLEVRKPRQITREGCKAMIMVRKEKTGKWVVTKLETKHNHPM 170
                     8***************************************9999997776667789**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MKAGNTEEAY QEKEYMMELD VDLGSKIVEC SIGREICVTE AGEMLDLYEG RELGIHEIDI  60
NVQPYVEMEF ESEEAAMMYY DAYAKRLGFI IRVGNCHRSG REGSVISRRF LCNKEGFRVN  120
NNKTRNTRSL EVRKPRQITR EGCKAMIMVR KEKTGKWVVT KLETKHNHPM GISVGKGRRC  180
TVQARPQITL IA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.19e-26FAR1 family protein