PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023918657.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

AP2

Protein Properties

Length: 655aa MW: 72926.7 Da PI: 6.8513

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023918657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.1	1.5e-15	316	375	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_023918657.1 316 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDLEEKAARAYDLAALKYWG 375 78*****************988886678446***********************98 PP
2	AP2	45.7	1.7e-14	420	469	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_023918657.1 420 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 469 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MKSMENDDNN NNNNKWLGFS LSPHMTMEVP SGPSNQHQTH PSTGAVPANF FNSSPHLNYG 60 IYYGAEGENA SFYSPLSMMP LKSDGSLCIM EALNRSQQPQ AMVSTSTPKL EDFFGGATMG 120 THHFDSNDRE AMVLSLDSMF YSQNPDQQPN NQNCLDHFQP NSRHQEQPQQ IQEQQYSYYS 180 GFRSHDMMLG EARENQFADC SLQLPTVADD GVPGMKNWIS RNYSANHSVE QKMIGCMGDN 240 GGESGTIGAV AYGDLQSLSL SMSPGSQSSS VTGSQHVSPT VTDCTAMDTK KRGPEKVDQK 300 PIVHRKSLDT FGQRTSQYRG VTRHRWTGRY EAHLWDNSCK KEGQSRKGRQ VYLGGYDLEE 360 KAARAYDLAA LKYWGPSTHI NFPLENYEKE LEEMKNMTRQ EYVAHLRRKS SGFSRGASMY 420 RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY DIAAIKFRGV NAVTNFDITR 480 YNVERIMASS TLLAGEQAKR NKETGSTIEV LNNPSTDSSN GEAFLSQKNN ECESDWKTVI 540 NQSSQELNYK PLKFENYRTQ SFSMSSHNMI QQEVEDSTKM GAHVSNASSL VTSVSSSREG 600 SPDKTSLPVL LGLPPTASKL FTSPTGAVNS WIPSAQLRPA HSVPHMPVFA AWTDT

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MKSMENDDNN NNNNKWLGFS LSPHMTMEVP SGPSNQHQTH PSTGAVPANF FNSSPHLNYG  60
IYYGAEGENA SFYSPLSMMP LKSDGSLCIM EALNRSQQPQ AMVSTSTPKL EDFFGGATMG  120
THHFDSNDRE AMVLSLDSMF YSQNPDQQPN NQNCLDHFQP NSRHQEQPQQ IQEQQYSYYS  180
GFRSHDMMLG EARENQFADC SLQLPTVADD GVPGMKNWIS RNYSANHSVE QKMIGCMGDN  240
GGESGTIGAV AYGDLQSLSL SMSPGSQSSS VTGSQHVSPT VTDCTAMDTK KRGPEKVDQK  300
PIVHRKSLDT FGQRTSQYRG VTRHRWTGRY EAHLWDNSCK KEGQSRKGRQ VYLGGYDLEE  360
KAARAYDLAA LKYWGPSTHI NFPLENYEKE LEEMKNMTRQ EYVAHLRRKS SGFSRGASMY  420
RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY DIAAIKFRGV NAVTNFDITR  480
YNVERIMASS TLLAGEQAKR NKETGSTIEV LNNPSTDSSN GEAFLSQKNN ECESDWKTVI  540
NQSSQELNYK PLKFENYRTQ SFSMSSHNMI QQEVEDSTKM GAHVSNASSL VTSVSSSREG  600
SPDKTSLPVL LGLPPTASKL FTSPTGAVNS WIPSAQLRPA HSVPHMPVFA AWTDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-129	AP2 family protein