PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023918680.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 422aa MW: 47838.6 Da PI: 8.127

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023918680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.3	9.2e-27	29	117	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY+++vGFs+rk++ +k k++g +t+r+fvC keg r ++k++ ++ +++raetr+gC+a+l++ +++ ++k++v+++ eHnH l XP_023918680.1 29 DFYNEYGRKVGFSIRKEYVNKCKKTGVVTSRRFVCVKEGVRGKDKRD-QNVKNPRAETRCGCEAHLVIVLNRdSKKYVVSEFIAEHNHYL 117 6*****************************************999.999**************99989************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MGIHVPSNVP MKSTSFKGMK FEADEIAYDF YNEYGRKVGF SIRKEYVNKC KKTGVVTSRR 60 FVCVKEGVRG KDKRDQNVKN PRAETRCGCE AHLVIVLNRD SKKYVVSEFI AEHNHYLHLP 120 STVHMMPSQG KVAATHVIEI DLAHELELRL KKSYELLSKQ ANARMIIDYS HFGDVITFDT 180 TYSTNRDARP LGVFLGLNHY RETVVFGGAL LYDETIESFV WLFETFLEAM FEKKLITIFT 240 DQDAAMSAEK WAQAYVKKNF TAGMKTTQLS ESFNADLKDC LCTDLNIVEF FTHLETVVSQ 300 KRDKELEAEY NSRQKFPRLK LKSSPMLNQV ATMYMPKLFD LFQIKVEEST STSSTSYQGG 360 SSASVALVSY LESISNVVGS NDKINSARGL LTQGSVASEG PLTQESFTSG WNEMVHKVKP 420 FF

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MGIHVPSNVP MKSTSFKGMK FEADEIAYDF YNEYGRKVGF SIRKEYVNKC KKTGVVTSRR  60
FVCVKEGVRG KDKRDQNVKN PRAETRCGCE AHLVIVLNRD SKKYVVSEFI AEHNHYLHLP  120
STVHMMPSQG KVAATHVIEI DLAHELELRL KKSYELLSKQ ANARMIIDYS HFGDVITFDT  180
TYSTNRDARP LGVFLGLNHY RETVVFGGAL LYDETIESFV WLFETFLEAM FEKKLITIFT  240
DQDAAMSAEK WAQAYVKKNF TAGMKTTQLS ESFNADLKDC LCTDLNIVEF FTHLETVVSQ  300
KRDKELEAEY NSRQKFPRLK LKSSPMLNQV ATMYMPKLFD LFQIKVEEST STSSTSYQGG  360
SSASVALVSY LESISNVVGS NDKINSARGL LTQGSVASEG PLTQESFTSG WNEMVHKVKP  420
FF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-44	FAR1 family protein