PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918927.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YC
Protein Properties Length: 223aa    MW: 25184.3 Da    PI: 10.2878
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC45.31.9e-141152031199
           NF-YC  11 ekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                      ++++ k h++P+ rik il++++   +i+ ea  l+ ka e f+ e+t  +   + + ++++l    ++++v +t  fdfl d vp++
  XP_023918927.1 115 VDKEEAKTHRFPMNRIKTILRSQDSDLRITHEALFLVNKATEKFLEEFTKDAHACCVQDHKKSLAYKHLSSVVCKTRSFDFLSDFVPEK 203
                     45678899**************999999**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MASSKKSTTE EQKSKETKPK NTPKKKNKTT STTKGNPEKN NNNNNKKKVS NGTVSDSSSD  60
VIIIPSSSIE FGQDEKRKPD KSSGANKRTA DADTKSKKHK QKKQKRQEED VNDVVDKEEA  120
KTHRFPMNRI KTILRSQDSD LRITHEALFL VNKATEKFLE EFTKDAHACC VQDHKKSLAY  180
KHLSSVVCKT RSFDFLSDFV PEKLKAKDAL AERKIAETEN EAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.13e-29NF-YC family protein