PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023919208.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 914aa MW: 102514 Da PI: 9.7106

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023919208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27	1e-08	228	272	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WTt Ed+ l+ +v++ G +W Ia +g+ Rt+ qc r+q XP_023919208.1 228 NPWTTMEDKNLLLLVQEKGIINWFDIAVSLGTDRTPFQCLARYQR 272 69*****************************************96 PP
2	Myb_DNA-binding	39.4	1.4e-12	280	324	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT++Ed +l av+ +G +W ++a+t+ gR + qc +rw k XP_023919208.1 280 KGAWTKDEDAQLCAAVEVFGESDWQSVASTLE-GRAGTQCSNRWKK 324 79****************************.*********98 PP
3	Myb_DNA-binding	48.9	1.5e-15	334	377	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 grW ++Ed++l+ av ++G+++W++Ia+ ++ gRt qc++rw + XP_023919208.1 334 GRWIEDEDKRLKVAVMLFGPKNWNKIAQFVP-GRTQVQCRERWVN 377 89***************************.*********87 PP
4	Myb_DNA-binding	49.7	8.3e-16	387	430	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd +l+ a++++G W+++a++++ Rt++qc+ rw +l XP_023919208.1 387 EWTEEEDSKLKAAIAEHGYC-WAKVAACVP-PRTDNQCRRRWKVLL 430 6***************99.*****.9********9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 914 aa Download sequence
MLPLKKSSFP KSALLLMDAI KKNRSSQKFI RSQLVNLEAR IEENKKLKER VKILKDFQAS 60 CKKRTGRALS QRKDPRVQLI SVKKSLVSKD SKVNDKRVHA MYYGPAENSH VTNYRMALTT 120 FPLSLERKKW SKAERENLGK GIRQQFQEMV LQISVDQLSD LDGSCGDSND FDKILVSIKD 180 LEVTPENLRE FLPKVNWEQL ASMYVVGRSG AECEVRWLNY EDPLINHNPW TTMEDKNLLL 240 LVQEKGIINW FDIAVSLGTD RTPFQCLARY QRSLNASILK GAWTKDEDAQ LCAAVEVFGE 300 SDWQSVASTL EGRAGTQCSN RWKKSLHPAR ERVGRWIEDE DKRLKVAVML FGPKNWNKIA 360 QFVPGRTQVQ CRERWVNSLD PSLSWSEWTE EEDSKLKAAI AEHGYCWAKV AACVPPRTDN 420 QCRRRWKVLL PHEVPMLKEA RRIQKAALIS NFVDREVERP ALGPSDFLPL PMIGSISEPE 480 NKNSCSKQKG RLRGKATSKE KKNAASCNVP RKNRFKKCEQ QSQVCSGTIE KKKHPKPCSK 540 RKKCIKPVAD NQSLVLLPES LESGTTNGEC VEAAIDNNST SNKKTSKHCS RRIKCTTDLG 600 GNQNAMLSSA KSMLSGITND EHPLDHVSCP DSTLLPITNG EVVDSMNEHV RTGKQRPTKL 660 QSKRKKCMEL AEDSHSFSSH PESGEFGKTD GEGVESSILD MGKGAVKQQK RRKIRNEPSG 720 KCQDVSVLFQ QDKLEVSKHR NISSKQILGA TNGDDVTLAC FLHNKPKKRR LEVAKNTSQA 780 CSSSSPKKGV ESLSNVADKL KYGNQNLSTT QDKESQAFCL GGNPDDLLPC KLSSHLVDKP 840 TMIDSDNGPD RKDLVQGQHT AHDPVSFSPE GDCEEDGDIT LACLLQNKLK KKKGSKSISR 900 VNRHNDGNPS NMQG

Sequence ? help Back to Top

Protein Sequence Length: 914 aa Download sequence

MLPLKKSSFP KSALLLMDAI KKNRSSQKFI RSQLVNLEAR IEENKKLKER VKILKDFQAS  60
CKKRTGRALS QRKDPRVQLI SVKKSLVSKD SKVNDKRVHA MYYGPAENSH VTNYRMALTT  120
FPLSLERKKW SKAERENLGK GIRQQFQEMV LQISVDQLSD LDGSCGDSND FDKILVSIKD  180
LEVTPENLRE FLPKVNWEQL ASMYVVGRSG AECEVRWLNY EDPLINHNPW TTMEDKNLLL  240
LVQEKGIINW FDIAVSLGTD RTPFQCLARY QRSLNASILK GAWTKDEDAQ LCAAVEVFGE  300
SDWQSVASTL EGRAGTQCSN RWKKSLHPAR ERVGRWIEDE DKRLKVAVML FGPKNWNKIA  360
QFVPGRTQVQ CRERWVNSLD PSLSWSEWTE EEDSKLKAAI AEHGYCWAKV AACVPPRTDN  420
QCRRRWKVLL PHEVPMLKEA RRIQKAALIS NFVDREVERP ALGPSDFLPL PMIGSISEPE  480
NKNSCSKQKG RLRGKATSKE KKNAASCNVP RKNRFKKCEQ QSQVCSGTIE KKKHPKPCSK  540
RKKCIKPVAD NQSLVLLPES LESGTTNGEC VEAAIDNNST SNKKTSKHCS RRIKCTTDLG  600
GNQNAMLSSA KSMLSGITND EHPLDHVSCP DSTLLPITNG EVVDSMNEHV RTGKQRPTKL  660
QSKRKKCMEL AEDSHSFSSH PESGEFGKTD GEGVESSILD MGKGAVKQQK RRKIRNEPSG  720
KCQDVSVLFQ QDKLEVSKHR NISSKQILGA TNGDDVTLAC FLHNKPKKRR LEVAKNTSQA  780
CSSSSPKKGV ESLSNVADKL KYGNQNLSTT QDKESQAFCL GGNPDDLLPC KLSSHLVDKP  840
TMIDSDNGPD RKDLVQGQHT AHDPVSFSPE GDCEEDGDIT LACLLQNKLK KKKGSKSISR  900
VNRHNDGNPS NMQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.2	0.0	MYB family protein