PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919227.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 260aa    MW: 29843.6 Da    PI: 5.8352
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919227.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.65.3e-144495154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +r  hn+ Er RR++iN+ +++Lr+llPka   +++Kls  +++    +YI +L
  XP_023919227.1 44 KRLYHNASERDRRKKINTLYSTLRSLLPKA--DQAEKLSVPDTVSWMLKYIPEL 95
                    6889*************************5..5******************888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MSNTLNNYFH RETEASAASF AEEGQPPFQT EVELNRSTPS TMAKRLYHNA SERDRRKKIN  60
TLYSTLRSLL PKADQAEKLS VPDTVSWMLK YIPELEQQVE VLIQKKEELI SRISTQGEQI  120
HQENQRTIVG RSSLSAVSAN WLNDNEVMIQ ISIYKVHKSP LADILLNLEK DGFLVLNASS  180
FECFGGRIFH NLHLQTERSY ALEHEREVVL SEKLLSFYEK EEGFKEENHG PIYFNATSCI  240
VPRIQSDHYI GESTYVCASL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-54bHLH family protein