PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919228.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 196aa    MW: 22588.1 Da    PI: 9.9296
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919228.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.88.2e-13354154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +r  hn+ Er RR+++N  +++Lr+llP+a   +++Kls  ++  +  +YI +L
  XP_023919228.1  3 KRIYHNASERDRRKKMNALYSTLRSLLPSA--DQAEKLSVPTTISRMLKYIPKL 54
                    6889*************************5..5******************888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MAKRIYHNAS ERDRRKKMNA LYSTLRSLLP SADQAEKLSV PTTISRMLKY IPKLEQEVEV  60
LMQKKEELIS RISRQGEQIH QENQRQIVGR SSLSVVSANW LNDREVMIQI STYKVHKCPL  120
ANILLNLEKD GFLVLNVSTF ECFGGRVFHN LHLQAERSYA LERAVALSEK LLSFYEMGKG  180
FKHENHHGSV VNAFMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.18e-52bHLH family protein