PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919262.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YC
Protein Properties Length: 116aa    MW: 13104.4 Da    PI: 10.3454
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919262.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC98.84.2e-3118991898
           NF-YC 18 nhelPlarikkilkad.edvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                     h lPlarikki+k+  ++v++is eaP+++ +acelfi +lt rsw+ + + krrtl+k d+ +av  tdifdflv  v  
  XP_023919262.1 18 PHLLPLARIKKIMKKSgDNVNVISGEAPIVFVNACELFIEDLTRRSWMVTMKGKRRTLHKDDVVSAVMATDIFDFLVSLVSD 99
                    689**********865278**********************************************************98865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MQQAGIYSGM LIWRKTRPHL LPLARIKKIM KKSGDNVNVI SGEAPIVFVN ACELFIEDLT  60
RRSWMVTMKG KRRTLHKDDV VSAVMATDIF DFLVSLVSDS TNHLDLTTVK RGTLES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.17e-29NF-YC family protein