PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023919321.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 143aa MW: 16581.1 Da PI: 10.2506

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023919321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.3	3.5e-33	80	133	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l++m+v+gLtl+hvkSHLQ+YR+ XP_023919321.1 80 PRLRWTPDLHLCFVHAVERLGGEDRATPKMVLQIMNVNGLTLSHVKSHLQMYRS 133 8****************************************************7 PP
2	Myb_DNA-binding	51.8	1.9e-16	81	132	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg+ t+k + + m+ +g+tl ++ks++q+y+ XP_023919321.1 81 RLRWTPDLHLCFVHAVERLGGEdraTPKMVLQIMNvNGLTLSHVKSHLQMYR 132 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MKRFEGESSH KDSSFSSLVN EEYLSKSHKG SSFSSFVNEE YLSKSSHIMR PSKRHAIEKL 60 PELSLKSPPV VRPYVRSKMP RLRWTPDLHL CFVHAVERLG GEDRATPKMV LQIMNVNGLT 120 LSHVKSHLQM YRSMKHEQML EGW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	9e-35	G2-like family protein