PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919335.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family S1Fa-like
Protein Properties Length: 84aa    MW: 9279.06 Da    PI: 10.4384
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA139.76.1e-441984570
            S1FA  5 kveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                     ++akGlnPGlivll+vgglll+flvgny+lyvyaqk+lPPrkkkPvskkk+k+eklkqGv++PGe
  XP_023919335.1 19 DAQAKGLNPGLIVLLIVGGLLLTFLVGNYVLYVYAQKTLPPRKKKPVSKKKMKKEKLKQGVSAPGE 84
                    5689*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MDDSFEFDGK VPPSFDRMDA QAKGLNPGLI VLLIVGGLLL TFLVGNYVLY VYAQKTLPPR  60
KKKPVSKKKM KKEKLKQGVS APGE