PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919536.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YC
Protein Properties Length: 222aa    MW: 24968 Da    PI: 10.1772
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919536.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC45.31.8e-141142021199
           NF-YC  11 ekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                      ++++ k h++P+ rik il++++   +i+ ea  l+ ka e f+ e+t  +   + + ++++l    ++++v +t  fdfl d vp++
  XP_023919536.1 114 VDKEEAKTHRFPMNRIKTILRSQDSDLRITHEALFLVNKATEKFLEEFTKDAHACCVQDHKKSLAYKHLSSVVCKTRSFDFLSDFVPEK 202
                     45678899**************999999**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MASSKKSTTE EQKSKETKPK NTPKKKNKTT STTKGNPEKN NNNNNKKVSN GTVSDSSSDV  60
IIIPSSSIES GQDEKQKPDK SSGANKRTAD ADTKSKKHKQ KKQKRQEEDV NDVVDKEEAK  120
THRFPMNRIK TILRSQDSDL RITHEALFLV NKATEKFLEE FTKDAHACCV QDHKKSLAYK  180
HLSSVVCKTR SFDFLSDFVP EKLKAKDALA ERKIAETENE AA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.12e-29NF-YC family protein