PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919897.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 158aa    MW: 17753 Da    PI: 8.902
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.9e-104787954
                    HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     r RR+ri ++f  L++l+P        K++ +++Le+A++Y+k L
  XP_023919897.1 47 ARERRHRISDRFKILQSLVPGG-----SKMDTVSMLEEAIHYVKFL 87
                    699*****************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MDYLSTSTNP SSSGFSSAGN NNKEKKPKGG KRSKGVKLST DPQSVAARER RHRISDRFKI  60
LQSLVPGGSK MDTVSMLEEA IHYVKFLKTQ IWLHQTMINF ADEDPSLYLA GTYLPPQETY  120
YAQNVLVDQV QPSELVPRPI SSSFQCEEPV PFDTYGKY