PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919940.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YA
Protein Properties Length: 187aa    MW: 20615.9 Da    PI: 8.4288
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.53.9e-32113169158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq+Rak+e+e+k  +ksrkpylheSRh hAlrR+Rg+gGrF
  XP_023919940.1 113 EEPVFVNAKQYHGILRRRQSRAKAESEHKA-IKSRKPYLHESRHLHALRRARGCGGRF 169
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MTSSVNDLSD NSEADEQQKH SESQIHSSSP ITGMSHPGVT TSNVQYPTPP QLGAGPAMGP  60
AAYPYPDPYY RSIFAPYDAQ PYPPQPYGGQ PMVHLQLMGI QQAGVPLPSD AVEEPVFVNA  120
KQYHGILRRR QSRAKAESEH KAIKSRKPYL HESRHLHALR RARGCGGRFL NSKKDENQQN  180
EVASGDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.24e-54NF-YA family protein