PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919947.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 82aa    MW: 9486.09 Da    PI: 10.0347
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.14.3e-18956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd ll+++++++G g W++++   g++R++k+c++rw++yl
   XP_023919947.1  9 KGAWSEEEDILLKQCIQKYGEGKWHLVPVSAGLNRCRKSCRLRWLNYL 56
                     79*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MEGSFGVRKG AWSEEEDILL KQCIQKYGEG KWHLVPVSAG LNRCRKSCRL RWLNYLKPNI  60
KRGNFAADEV DLMLRLHKLL GN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.11e-42MYB family protein