PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920408.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Nin-like

Protein Properties

Length: 863aa MW: 95868.3 Da PI: 6.2655

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920408.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.5	1.3e-28	566	617	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i le+l++yF++++kdA+k++gvc+T+LKriCRq+GI+RWP+Rkik++ XP_023920408.1 566 AEKTIPLEVLQQYFAGSLKDASKSIGVCPTTLKRICRQHGINRWPSRKIKKV 617 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 863 aa Download sequence
MENGFSAPGT ILGALPNSAM ELALFDELFQ DRCWLEAAEG LEFLLQSPSS SGSVLGPSFV 60 WPALEARDNL SLNSSQTGNL DEAQRPLPDE SQERSLVNAV SLGQNTVDVV AGCSNESENI 120 VIKGPKLGRR SQIAPNMNQG LTYCLEERLM KAIEYIREFT RGKDVLIQVW LPVNRDGRRV 180 LTTSNQPFAF GSSNPSLASY RDISADFHFA AEEDSKEVLG LPGRVFLGKV PEWTPDVQFF 240 TKNEYFRVVH AQLYDVRGTL ALPIFEHGSS NCVGVIEVVM TAQQTQYGPE IESVCKALEA 300 VDLRSFDALS TENLKACPKS YQAALPEIQE VLRFACKTHR LPLAQTWVPC IQQGKVGCRH 360 SNENYIYCVS TVDRACIVAD PNMQEFHEAC SEHHLLKGEG IVGEAFKTNQ PHFSSDITSL 420 SKAEYPLSHH ARLFGLHAAV AIHLRSIHTG TDDFVLEFFL PTDCRDPEEQ KNMLNSLSCI 480 IQQVCRSLRV VTDKELEEDT NLPVNGTGKL SREEILKEKS FEFCQPYQDS NLKVNVDCGE 540 ECSMHGEGNF PSVGKAKTGE KRRTKAEKTI PLEVLQQYFA GSLKDASKSI GVCPTTLKRI 600 CRQHGINRWP SRKIKKVGHS LKKLQLVINS VEGASGALQI DSFYTKFPKL ASPNLSRTNP 660 FSASKLSDHP QPILQPEGGI FSPQTAASKS PYSSCSQSSS SSHAPTRNVV GCKDPIVGEN 720 FSDSALQRIT SEAELHASSQ APKLQPKLEC LKSFNEHPSA ENFPPLQKLK VTYGDEKIRL 780 RMKNNWRYKN LLLEIASRFN IDDISRFDVK YLDDDSEWVL LTCDDDLEEC IDICRSSQSN 840 TIKLALQVSR HHVGRSLGSN DTS

Sequence ? help Back to Top

Protein Sequence Length: 863 aa Download sequence

MENGFSAPGT ILGALPNSAM ELALFDELFQ DRCWLEAAEG LEFLLQSPSS SGSVLGPSFV  60
WPALEARDNL SLNSSQTGNL DEAQRPLPDE SQERSLVNAV SLGQNTVDVV AGCSNESENI  120
VIKGPKLGRR SQIAPNMNQG LTYCLEERLM KAIEYIREFT RGKDVLIQVW LPVNRDGRRV  180
LTTSNQPFAF GSSNPSLASY RDISADFHFA AEEDSKEVLG LPGRVFLGKV PEWTPDVQFF  240
TKNEYFRVVH AQLYDVRGTL ALPIFEHGSS NCVGVIEVVM TAQQTQYGPE IESVCKALEA  300
VDLRSFDALS TENLKACPKS YQAALPEIQE VLRFACKTHR LPLAQTWVPC IQQGKVGCRH  360
SNENYIYCVS TVDRACIVAD PNMQEFHEAC SEHHLLKGEG IVGEAFKTNQ PHFSSDITSL  420
SKAEYPLSHH ARLFGLHAAV AIHLRSIHTG TDDFVLEFFL PTDCRDPEEQ KNMLNSLSCI  480
IQQVCRSLRV VTDKELEEDT NLPVNGTGKL SREEILKEKS FEFCQPYQDS NLKVNVDCGE  540
ECSMHGEGNF PSVGKAKTGE KRRTKAEKTI PLEVLQQYFA GSLKDASKSI GVCPTTLKRI  600
CRQHGINRWP SRKIKKVGHS LKKLQLVINS VEGASGALQI DSFYTKFPKL ASPNLSRTNP  660
FSASKLSDHP QPILQPEGGI FSPQTAASKS PYSSCSQSSS SSHAPTRNVV GCKDPIVGEN  720
FSDSALQRIT SEAELHASSQ APKLQPKLEC LKSFNEHPSA ENFPPLQKLK VTYGDEKIRL  780
RMKNNWRYKN LLLEIASRFN IDDISRFDVK YLDDDSEWVL LTCDDDLEEC IDICRSSQSN  840
TIKLALQVSR HHVGRSLGSN DTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein