PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023920467.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ZF-HD
Protein Properties Length: 296aa    MW: 33611.8 Da    PI: 8.0397
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023920467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer956e-3064128357
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegt..........aaalkCaACgCHRnFHRrev 57 
                     +v+YkeC++NhAaslGgha DGCgEfmp  +++++           ++l+CaACgCHRnFHRrev
  XP_023920467.1  64 TVVYKECMRNHAASLGGHANDGCGEFMPRVTTTNNnnnvvkdqqhEDSLTCAACGCHRNFHRREV 128
                     689*************************9777644689*****999*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MDLTVVPYNN HTPKTENGND DVKKNNNTNN HHNNNNNNNN NDVADREPVV MNPSSKTVNN  60
TVITVVYKEC MRNHAASLGG HANDGCGEFM PRVTTTNNNN NVVKDQQHED SLTCAACGCH  120
RNFHRREVFG GEPPHHHPVH LHSPPPMFAL YNGGPATVPR GHPHPHHHHH HQYHQHHGGD  180
HHDRGRSETP ERVVGPVTIT RSGSTNNTTS AKRFRTKFTQ EQREKMLEFA ERIGWRIQRH  240
DDVALNQFCS EIGVKRNVLK VWMHNNKNAH RRRESGPDDS PSEPPQQQEE QQPIGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-45ZF-HD family protein