PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023920795.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 312aa    MW: 34996.5 Da    PI: 4.7804
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023920795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.5e-11127170755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + ErrRR ++++++  Lr+l+P+      +K++Ka+i+  Av Y+++Lq
  XP_023920795.1 127 ISERRRRGKMKEKLYALRSLVPNI-----TKMDKASIVGDAVLYVQELQ 170
                     67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEASANPLVN INDFELHDFI DETNFHHCIN LIRGGSNDPV VNFDTDLINN CFVDNQFGPN  60
PGDMYDFNAT TMMSDPNTMF NTLGSFGDDV KDGDEDNDRE DSSATTTTTT TTTPTKRAKG  120
DRSRTLISER RRRGKMKEKL YALRSLVPNI TKMDKASIVG DAVLYVQELQ SKAKQLKSEI  180
AGLEASLVGS ERYQGSIESP KKVQMVQNNY QVSKKIIMQM DVFQVEERGF YVRLVCNKGG  240
GVALSLYKVL ESLTNFIVQS SNLATVSERF VLTFTLNVID SEQEIHLPNL RLWIAGALMN  300
QQFELETPLS YA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.17e-86bHLH family protein