PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023920804.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 255aa    MW: 28976.9 Da    PI: 9.0286
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023920804.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.0003598120223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+++++++ +L  H +  H
  XP_023920804.1  98 SCSVCSRVYPTSRLLSIHVSElH 120
                     6*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MAMEEHDEEK KQQLGFPYWK SIPRSFGPES PFFASGNIER ELLAKQVALD LTEDEKHQLQ  60
NMVVEEGGGI FCPIVGCGLR LTSLENFEDH YNARHTASCS VCSRVYPTSR LLSIHVSELH  120
DSFFQAKVAR GYAVYECLVE GCGLKFKSYK SRQRHLVDKH KFPTSFEFYK KAHLSKKQRQ  180
KLQRKQATHK REEDSCMEVD NESIDGLISG ISKLSTSDSP SSVSFGRRHT RGLTFVPRAV  240
QREKMPGPTS AGTKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.11e-114C2H2 family protein