PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920951.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 423aa MW: 49142.7 Da PI: 6.4542

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.5	1.5e-25	64	151	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Yn+YA++ GF +r+++++k+k+++ + ++vCskeg+r++++++te+ +raetr+gCka++ +kk +++w+v k++++HnHel XP_023920951.1 64 CYNAYARRKGFGIRVNHTRKTKNDRILVGIEYVCSKEGFRRRHDEDTERIGLERAETRVGCKAMIGLKKI-EDTWVVCKFVEDHNHELL 151 7*******************************************999999**************.9*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MSASNEEPET ISLYDMVDDE LEINEDQNDV DLSLNDSNQP FACNRHLEPC LNMVFDKLED 60 AKACYNAYAR RKGFGIRVNH TRKTKNDRIL VGIEYVCSKE GFRRRHDEDT ERIGLERAET 120 RVGCKAMIGL KKIEDTWVVC KFVEDHNHEL LTPKSTSMLR GHRVITNAQR NLIDTLNETG 180 NKRRKLLQDG DVQGMYKYFI EQQCKNPGFV YAVEVDENGC MGVNHHHQSV MFGCALLVNE 240 TAESYTWLLK TWLNAMLGNP PSTIITDDDK AMAKAIANVL PNATHRLCMW HILQKVPDQL 300 SHIYNKYPYF QGEFHHCIHD TLTIEEFELG WSKIMENYGL GDNDWLGNLY MRREKWIPAY 360 LRRKFCAGMS TTQRSESVNK FFKDYVRSST TISDFVYQYE QALNARYLKE KEQDSKIQGI 420 QIL

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MSASNEEPET ISLYDMVDDE LEINEDQNDV DLSLNDSNQP FACNRHLEPC LNMVFDKLED  60
AKACYNAYAR RKGFGIRVNH TRKTKNDRIL VGIEYVCSKE GFRRRHDEDT ERIGLERAET  120
RVGCKAMIGL KKIEDTWVVC KFVEDHNHEL LTPKSTSMLR GHRVITNAQR NLIDTLNETG  180
NKRRKLLQDG DVQGMYKYFI EQQCKNPGFV YAVEVDENGC MGVNHHHQSV MFGCALLVNE  240
TAESYTWLLK TWLNAMLGNP PSTIITDDDK AMAKAIANVL PNATHRLCMW HILQKVPDQL  300
SHIYNKYPYF QGEFHHCIHD TLTIEEFELG WSKIMENYGL GDNDWLGNLY MRREKWIPAY  360
LRRKFCAGMS TTQRSESVNK FFKDYVRSST TISDFVYQYE QALNARYLKE KEQDSKIQGI  420
QIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-94	FAR1 family protein