PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023921166.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family SBP
Protein Properties Length: 150aa    MW: 17300.9 Da    PI: 7.2057
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023921166.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP135.41.8e-4265142178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cq+e+C++dl++ak+yhrrhkvC++h+kapvv v+g++qrfCqqCsrfh+l+efDe+krsCrrrLa+hnerrrk+++
  XP_023921166.1  65 TCQAEDCNVDLTDAKHYHRRHKVCDFHAKAPVVSVAGIQQRFCQQCSRFHQLTEFDESKRSCRRRLAGHNERRRKSSS 142
                     6**************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
METSKAEEKR SFKYKMEDED EDEDDDEYTN NELGSGEEER RKRMMTPSPS TKKGSGSGGG  60
STPPTCQAED CNVDLTDAKH YHRRHKVCDF HAKAPVVSVA GIQQRFCQQC SRFHQLTEFD  120
ESKRSCRRRL AGHNERRRKS SSEFHREGSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.14e-40SBP family protein