PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023921356.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 275aa MW: 32541.3 Da PI: 8.4928

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023921356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.4	3.8e-19	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd ll+++v+++G g+W+++ar g++R +k+c++rw +yl XP_023921356.1 22 KGPWTSEEDRLLIEYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 69 79********************************************97 PP
2	Myb_DNA-binding	51.7	2e-16	75	119	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ XP_023921356.1 75 RGQITPHEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 119 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MNWEVMAGQL GWGIMEDEGW RKGPWTSEED RLLIEYVRLH GEGRWNSVAR LAGLKRNGKS 60 CRLRWVNYLR PDLKRGQITP HEESIILELH ARWGNRWSTI ARSLPGRTDN EIKNYWRTHF 120 KKKVKVTSEA SEKAKNRILR RQQFHHHQQQ QQQQHQQLQQ QQHQQQQQHQ QQQHQQQFQL 180 NQVDLKRIMA LFDENDNQDT CVPQVRQEMT TMYPNTNEEQ GYFYSLLNSS VSVPEAANED 240 IVWDGLWNLD DVHGNFNAAS VTSRATLHNL VAPFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	4e-89	MYB family protein