PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023921459.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 250aa    MW: 27303.9 Da    PI: 4.6755
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023921459.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.93.9e-1660110155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +k+  +Wv+e r+p   +k+ r++lg+f tae+Aa+a++ a+ +l+g
  XP_023921459.1  60 PVYRGVR-RKNPWKWVCEMREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 110
                     68****9.66689*****9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MDVLRHYSDP QYLTESDICS WEFESGSGRI VNLSDEEVML ASQNPKKRDG RKKFKETRHP  60
VYRGVRRKNP WKWVCEMREP NKKSRIWLGT FPTAEMAARA HDVAAIALRG RSGCLNFADS  120
AWRLPVPASA AAKDIQRAAA EAAEAFRPAE LDTVFGDESS WKLESAAAAA VVVAVAAAAA  180
TAAVVGAATA AVVAVEMEEE GVFFMDEEEV FGMPGLLANL AEGMLLPPPH CYEGDDMGTD  240
TDMSLWSYSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-49ERF family protein