PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023921537.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 165aa MW: 18684 Da PI: 10.3268

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023921537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	36	58	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H XP_023921537.1 36 FECKTCNRQFPSFQALGGHRASH 58 89**********99999998887 PP
2	zf-C2H2	11.7	0.0008	84	106	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F L H+r+H XP_023921537.1 84 HECSICGLEFAMGQALGGHMRRH 106 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MAMKRMREDG GMEICLMLLS HSLETQLKKT SRVDVFECKT CNRQFPSFQA LGGHRASHKR 60 PKLMGEELKE RAKTQNQGNK PKMHECSICG LEFAMGQALG GHMRRHRAMM DGSFSSATIE 120 KKVPVLKRSN STRVMCLDLN LTPLENDLKL LFGKKAPQID FTLMV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	4e-44	C2H2 family protein