PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023921620.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 880aa MW: 99494.5 Da PI: 6.7088

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023921620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.5	1.9e-17	62	136	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y+eYA+++GFs ++ + ++sk +g+i++r+fvC +eg ++++ ++ C+a l+++++ ++kw+vtk+++eH+H+l+ XP_023921620.1 62 LYDEYARRLGFSSKVGQCSRSKSDGTIISREFVCGREGLKRRHADS--------------CDAVLRIELKGQEKWVVTKFVKEHSHSLV 136 6************************************9998777..............*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 880 aa Download sequence
MDVQVIDVEE GMGHRGVAND GDAELNEGEL NIAENSAAHN EDGFAEPYVG MEFDSEDVAK 60 TLYDEYARRL GFSSKVGQCS RSKSDGTIIS REFVCGREGL KRRHADSCDA VLRIELKGQE 120 KWVVTKFVKE HSHSLVSPSK LHYLRPRRHF AGSAKTMAET YQGVGIVPSG VMYVSMDGNH 180 VPVEANRGVR KTPTAESNRP VKNTAVMNYV VRPCNRKRTL GRDAQNLLEY FKKMQAENPG 240 FFYAIQLDED NRMANVFWAD ARSRTAYSHF GDAVTLDTMY RVNQYRVPFA PFTGVNHHGQ 300 TILFGCALLL DDSEASFIWL FKTFLTAMND HPPVSIITDQ DRAIQTAVSQ VFPEARHCIS 360 KWHVLREGQE KLAHVCHVHP NFQVELYNCI NLTETIEEFE SSWSTVLDKY DLRRNDWLQS 420 LYNARAQWVP VYFRDSFFGV LSPNQGFEGS FFDSYVNQQT TLPMFFRQYE RALDSWFEKE 480 IESDFDTICT MPVLRTPSPM EKQAANLYTR KIFAKFQEEL VETFVYTANR IEGDGAISTF 540 RVAKFEDDQK AYIVTLNYPD MRANCSCQMF EYSGILCRHV LTVFTVTNVL TLPPHYILKR 600 WTRNAKSGAG SDERGGELHG QESLTLRYNN LCREAIKYAE DGAIAVETYN AAMGALKEGG 660 KKVAVLKKNV AKVAPPSSQV SGIGYDDKKT STSASDMTPL LWPRQDEMTR RFNLNDTGPP 720 AQSVADLNLP RMAPVSLHRD DGPTENTVVL PCLKSMTWVM ENKNSPPGNR VAVINLKLQD 780 YSRNPSAESE VKFQLSRVSL EPMLRSMAYI SEQLSTPANK VAVINLKLQD TETTSGESEV 840 KFQVSRDTLG AMLRSMAYIR EQLSIVAETQ SEPLPKKQRK

Sequence ? help Back to Top

Protein Sequence Length: 880 aa Download sequence

MDVQVIDVEE GMGHRGVAND GDAELNEGEL NIAENSAAHN EDGFAEPYVG MEFDSEDVAK  60
TLYDEYARRL GFSSKVGQCS RSKSDGTIIS REFVCGREGL KRRHADSCDA VLRIELKGQE  120
KWVVTKFVKE HSHSLVSPSK LHYLRPRRHF AGSAKTMAET YQGVGIVPSG VMYVSMDGNH  180
VPVEANRGVR KTPTAESNRP VKNTAVMNYV VRPCNRKRTL GRDAQNLLEY FKKMQAENPG  240
FFYAIQLDED NRMANVFWAD ARSRTAYSHF GDAVTLDTMY RVNQYRVPFA PFTGVNHHGQ  300
TILFGCALLL DDSEASFIWL FKTFLTAMND HPPVSIITDQ DRAIQTAVSQ VFPEARHCIS  360
KWHVLREGQE KLAHVCHVHP NFQVELYNCI NLTETIEEFE SSWSTVLDKY DLRRNDWLQS  420
LYNARAQWVP VYFRDSFFGV LSPNQGFEGS FFDSYVNQQT TLPMFFRQYE RALDSWFEKE  480
IESDFDTICT MPVLRTPSPM EKQAANLYTR KIFAKFQEEL VETFVYTANR IEGDGAISTF  540
RVAKFEDDQK AYIVTLNYPD MRANCSCQMF EYSGILCRHV LTVFTVTNVL TLPPHYILKR  600
WTRNAKSGAG SDERGGELHG QESLTLRYNN LCREAIKYAE DGAIAVETYN AAMGALKEGG  660
KKVAVLKKNV AKVAPPSSQV SGIGYDDKKT STSASDMTPL LWPRQDEMTR RFNLNDTGPP  720
AQSVADLNLP RMAPVSLHRD DGPTENTVVL PCLKSMTWVM ENKNSPPGNR VAVINLKLQD  780
YSRNPSAESE VKFQLSRVSL EPMLRSMAYI SEQLSTPANK VAVINLKLQD TETTSGESEV  840
KFQVSRDTLG AMLRSMAYIR EQLSIVAETQ SEPLPKKQRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein