PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023921952.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 383aa MW: 44052.8 Da PI: 8.1056

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023921952.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.6	5.5e-15	83	178	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +Y++YAke GF v k++skk ++g + t Cs gk+ + + +++ + +++t+t+C+a+l++ + +kw + ++ l+HnH l XP_023921952.1 83 YYRRYAKEKGFVVAKRTSKKG-DDGVVRYVTIACSYVGKPMIRLNCpgikrtrSTNPVKLKPQTKTNCEAQLRLVLCPIAKWILRSIILDHNHGL 176 8***********9998887.9999**********9998888888776677777899******************************9 PP FAR1 90 ap 91 +p XP_023921952.1 177 SP 178 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MAGEISNVFS HVKLNKDNVE NDMVAGDSSE DIENDMVEVE SNEDNIENEI VELNEMVETG 60 VENKAEDLKL GMMFDSIVDV VIYYRRYAKE KGFVVAKRTS KKGDDGVVRY VTIACSYVGK 120 PMIRLNCPGI KRTRSTNPVK LKPQTKTNCE AQLRLVLCPI AKWILRSIIL DHNHGLSPSK 180 TRFYKCNRII EPHVKKKLEL HDKAGIRMNK SFNSFVVAVG GHKNLSFLEK DCRNHMEKVR 240 RSHLRERDAS AMYHYFLKMQ VDNFEFFYTM DFDDDGQLKN VFWANARIRA AFKEFDDVVT 300 FDTTYMVSKY EMPFAPFVGM NHHGQSTLLG CGLILREDTN SFILLFKCWL ACMSNCPPNA 360 IITDQDKAMK KAIEIVFPNA RHR

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MAGEISNVFS HVKLNKDNVE NDMVAGDSSE DIENDMVEVE SNEDNIENEI VELNEMVETG  60
VENKAEDLKL GMMFDSIVDV VIYYRRYAKE KGFVVAKRTS KKGDDGVVRY VTIACSYVGK  120
PMIRLNCPGI KRTRSTNPVK LKPQTKTNCE AQLRLVLCPI AKWILRSIIL DHNHGLSPSK  180
TRFYKCNRII EPHVKKKLEL HDKAGIRMNK SFNSFVVAVG GHKNLSFLEK DCRNHMEKVR  240
RSHLRERDAS AMYHYFLKMQ VDNFEFFYTM DFDDDGQLKN VFWANARIRA AFKEFDDVVT  300
FDTTYMVSKY EMPFAPFVGM NHHGQSTLLG CGLILREDTN SFILLFKCWL ACMSNCPPNA  360
IITDQDKAMK KAIEIVFPNA RHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	3e-57	FAR1 family protein