PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023922037.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Dof

Protein Properties

Length: 369aa MW: 40403.4 Da PI: 8.203

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023922037.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	4.7e-39	59	119	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++al+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ XP_023922037.1 59 QQQALRCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 119 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MLSKSNCEKM VVITPTTNEW PQNQIDDQKG MMASTGNRVM EKQVQEQQQQ QQQQQQQQQQ 60 QALRCPRCDS SNTKFCYYNN YSLSQPRHFC KACKRYWTRG GTLRNVPVGG GCRKNKRVKR 120 PSSASAVDGA SSSSAPSANT IPPSQPHLDI SSSTSNHHLN PLFFGLSSNP SDVSLPFPTR 180 FNPRVSNVET DSGYDLQPQL NALGLGFSSG IMANDASEND YRNGFNPSST SNSLNYSIFG 240 SSSSTATTSP TIASLLSSNF QQQKFMNGAM KDNRAPNHYQ SLAPFEGLHI ASNSAEAAGI 300 GIKQVKVEDS NSRLDWNDGN SRLDWNNGSC QNNQMEQVGL SDPSLYWNAT NMGAWNDPGN 360 IGSSVTSLI

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MLSKSNCEKM VVITPTTNEW PQNQIDDQKG MMASTGNRVM EKQVQEQQQQ QQQQQQQQQQ  60
QALRCPRCDS SNTKFCYYNN YSLSQPRHFC KACKRYWTRG GTLRNVPVGG GCRKNKRVKR  120
PSSASAVDGA SSSSAPSANT IPPSQPHLDI SSSTSNHHLN PLFFGLSSNP SDVSLPFPTR  180
FNPRVSNVET DSGYDLQPQL NALGLGFSSG IMANDASEND YRNGFNPSST SNSLNYSIFG  240
SSSSTATTSP TIASLLSSNF QQQKFMNGAM KDNRAPNHYQ SLAPFEGLHI ASNSAEAAGI  300
GIKQVKVEDS NSRLDWNDGN SRLDWNNGSC QNNQMEQVGL SDPSLYWNAT NMGAWNDPGN  360
IGSSVTSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	8e-44	Dof family protein