PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023922129.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family DBB
Protein Properties Length: 187aa    MW: 20507.1 Da    PI: 6.6556
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023922129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box20.31.2e-06433534
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                     C+ +e   +  fC  ++  lC++C ++ H
  XP_023922129.1  4 LCDACEGAAAVVFCAADEAALCHSCDEKVH 33
                    7******99******************998 PP
2zf-B_box28.72.7e-095391337
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg....H 37
                     ++C+ +e+ ++ ++Ce +++ lC +C +  H g    H
  XP_023922129.1 53 VPRCDICENAPAFFYCEVDGSSLCLQCDMIVHVGgkrtH 91
                    689**************************9996545555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MRTLCDACEG AAAVVFCAAD EAALCHSCDE KVHMCNKLAS RHVRVGLANP SAVPRCDICE  60
NAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFPGDKPGH IEEPASQPVD  120
QGETRRVQNQ PPKLTVVENQ QNHSVSPVPA SDANADGHAK NKKDTKMIDL NINPQRMHEH  180
GSNNQDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.13e-66DBB family protein