PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023922157.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 378aa    MW: 41929.9 Da    PI: 6.2545
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023922157.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.71.6e-18294328135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  XP_023922157.1 294 CSHCGVQKTPQWRTGPLGAKTLCNACGVRFKSGRL 328
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MLYRTHHPFF FQFHTFTSSN PPSSAPTTTT ITTSLPSLPF QTYRSVQGET EMECVEAALK  60
TSFRKEMALK PTPQAASEEL WAVKEQNGLT CDDFFVDELL DLSNEDGFVK EEEEEEKNKS  120
FVSDHENSNT KTTTFTASKD EFGSVPTSEL GVPADELADL EWLSHFVEDS FSEFSEPYPT  180
VILTDKPKVP EPEPEPEKPC FKTPVPAKAR SKRTRTGGRV WSLGSPSLTE SSSSSTTTSS  240
STSSSPSSPW LIYVNPGQNL EPAEPVYAEA QPPVKKQKKK LKETVGGTQT PRRCSHCGVQ  300
KTPQWRTGPL GAKTLCNACG VRFKSGRLLP EYRPACSPTF SNELHSNHHR KVLEMRRKKE  360
VPDVTTQSSL APAVVPSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1274281VKKQKKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.27e-82GATA family protein