PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023922279.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 306aa    MW: 33727 Da    PI: 7.1657
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023922279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.91.8e-1396139855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er RR+++++ f++L +llP++     +K +K++i+ +Av+YI+ Lq
  XP_023922279.1  96 TERERRKKMRNMFANLHDLLPQL----PPKADKSTIVDEAVNYIQTLQ 139
                     6*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MSEEGVGCHE SFFWENQSWG FTNSDNSAGG SEEKLGKKVP GSSSNSQAEI GMEEAVPLPI  60
VKKKGRGVSK NGKGSNGEGR AGKGSGESDH DVHIWTERER RKKMRNMFAN LHDLLPQLPP  120
KADKSTIVDE AVNYIQTLQH TLQKLQKQKL ERLQGVSSTF SFEPNTITSQ KLSYESREAF  180
LADQGSSNIQ AIGTTTTCSN SLPVLRNPVM FQTWTSSNVV LNICGNDAQI SVCSPKKPGL  240
LTTICYVMEK HKIEVVSAQI TSDYNRTMYM IQAHVTGASV QFQEAAFPVE EIYKQAVAEI  300
MLWVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.15e-52bHLH family protein