PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023922392.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 232aa    MW: 25667.1 Da    PI: 10.3105
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023922392.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding431e-134488347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT+eE+  ++ + k+lG+g+W+ I++++ ++R++ q+ s+ qky
   XP_023922392.1 44 PWTEEEHVVFLAGLKKLGKGDWRGISKKFVTTRSPSQVASHAQKY 88
                     8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MKKSFSTGNL SSKKINDDEA NTGYLSDGIV QRKAVDRERK KGTPWTEEEH VVFLAGLKKL  60
GKGDWRGISK KFVTTRSPSQ VASHAQKYFL RQAAIDKKKR RPSVFDLSLN EYEITPKDSP  120
VSQTKKSDGE RSSEATAAVQ NVNRFPHVCI DIPPSAQMSP LISGAPNYSW CPSMVGMPGN  180
EQFIPTVNFA RQSFPSYSWL PGTQRNFGTC APVITHPSGI PSPKSFPHSL SH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197101KKKRR
297102KKKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.12e-41MYB_related family protein