PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023922404.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 260aa    MW: 28595.2 Da    PI: 8.4047
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023922404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.3e-20145195255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  XP_023922404.1 145 HYRGVRRRP-WGKYAAEIRDPAKNG--ARVWLGTYETAEEAALAYDRAAYRMRG 195
                     7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MNFPTLGEFS FPQLCHRSSA SVGLFPYLTE QWGDLPFKVD DSEDMIVYNS LHDAVSFGWS  60
PLDLTAATTT ATAAATSIKA EPRDIFQQLA PGAAEPFRLA PQSAAQNNSY ESTFLALKSE  120
IEFSNTIASK KTENKVSATI TKERHYRGVR RRPWGKYAAE IRDPAKNGAR VWLGTYETAE  180
EAALAYDRAA YRMRGSKALL NFPHRIGSGE PEPVRITAKR REPEPGLENG GSAKRGKVAK  240
EIEAVFQLGS LPVAEQLLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.14e-43ERF family protein