PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023922407.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 236aa    MW: 26497.2 Da    PI: 5.6521
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023922407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-17126176255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+      r++lg+f+t  +Aa+a++ a+ k++g
  XP_023922407.1 126 HYRGVRRRP-WGKFAAEIRDPTRK--GHRVWLGTFDTDVDAARAYDCAAFKMRG 176
                     7********.**********8542..4**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MATPAADESS TIELIRQHLL GDFTSTEYFI NSLNFSSSPK AYYATQPVKL EAQSPPSDSE  60
SNSLILDSND HNQQTSDFET KGSIDSTPKP HISSPKHLSK NACIESKVPE VAEGSNKATD  120
YSEWRHYRGV RRRPWGKFAA EIRDPTRKGH RVWLGTFDTD VDAARAYDCA AFKMRGCKAI  180
LNFPLEAGAS NHPPAVETNG RKRRREKRVE TPESDDVAVE SWVFWEGKDQ EEDESC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1201205RKRRR
2201207RKRRREK
3201208RKRRREKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.14e-41ERF family protein