PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023922531.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

YABBY

Protein Properties

Length: 219aa MW: 24496.6 Da PI: 5.5352

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023922531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	197.4	6e-61	6	167	2	169
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 ++f+ seq+ yvqC+fC+t+l+vsvP +sl++vvtvrCGhCt l+svn+++++ l ++l + l++ ++++ ++ k+ + +s+s XP_023922531.1 6 QLFDLSEQIYYVQCGFCTTMLLVSVPCSSLSMVVTVRCGHCTALFSVNMNMMNASLVPIQNLWNCLNH-NEPTQQDCPDAQKVLD--WHSTSMLA 97 68999*******************************************999877777775444322.2222222222222222..23333333 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 ss + +ed ++ + v++PPekrqr+Psayn+fikeei+r+k++nP + h+eafsaaaknWahfP i ++ XP_023922531.1 98 SS---DYEEDGIISVNHIVNKPPEKRQRAPSAYNQFIKEEIKRLKTENPMMGHKEAFSAAAKNWAHFPAIQYK 167 33...34455555555569************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MSTLSQLFDL SEQIYYVQCG FCTTMLLVSV PCSSLSMVVT VRCGHCTALF SVNMNMMNAS 60 LVPIQNLWNC LNHNEPTQQD CPDAQKVLDW HSTSMLASSD YEEDGIISVN HIVNKPPEKR 120 QRAPSAYNQF IKEEIKRLKT ENPMMGHKEA FSAAAKNWAH FPAIQYKGDG DYSQDGDYSQ 180 SEENVTLGSE GTEVHEAGKG FREGKALKRS HMGYVDTLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	1e-61	YABBY family protein