PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023922672.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 238aa    MW: 26366.9 Da    PI: 4.6549
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023922672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.6e-172575155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s++kGVr +k +g++v+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  XP_023922672.1 25 SKFKGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 75
                    79*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MVKQNIEKLT KTTATIEEQR SESNSKFKGV RKRKWGKYVS EIRLPNSRER IWLGSYDSAE  60
KAARAFDAAL FCLRGRTAKF NFPNNPPEIP GGRSLKAAEI QTAAARFANS ESSAPPKSES  120
NSGHHLEMNN NNNNNSSSSF IPSPSVSEAT VETVQIDSDS ISTNNLDGSF LDFDLDLDLD  180
FLKTMGSINY GSDYGIFPGF DDLTNGLFTQ PLSNVDYGEE NLDGIASQES YNSFLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12834KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-54ERF family protein