PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023922674.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Nin-like

Protein Properties

Length: 969aa MW: 107064 Da PI: 4.9243

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023922674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.8	2.6e-29	584	635	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ XP_023922674.1 584 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 635 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 969 aa Download sequence
MDYPLSPKEK GTGFWQSPRP QLENSVSFEV TRSLNLEDSL SDLMNFDTDA GWYNSPSATD 60 QILTSYGLSS FPSTPYGVSS DALNFSEQNG VAFPVNEVGG TFNPVGNSFN CGDKLMFDQM 120 DSQYGFSTDS NDANGLATAQ NNCSFPQNSV FDMGNCMIPR PLSMSVDEKM LKALSLFKAS 180 SGGGILAQVW VPMRLGDQHI LSTWEQPYLL DEMLAGYREI SRSFVFPTER RSGSFLGLPG 240 RVFISKVPEW TSNVSYYNKV EYLRADHAAQ HEVRGSIAVP VFDSPEMSCC AVLELVTTKE 300 KSNFNAELET VCNALQAVKL RTTEPPRLRP QCLSKNQRAA LAEIIDVLRA VCHAHRLPLA 360 LTWIPCYYTE GSGDEMPRVR VREGNTNSNE KCILCIEETA CYVNDRTMEG FVYACLEHHL 420 EEGQGIAGKA LQSNHPFFYA DVKNYDISEY PLVHHARKFG LNAAVSIRLR STYTGEDDYI 480 LELFLPVNMK GSAEQQLLLN NLSGTMQRIC KSLRTVSDAE NQNFPLMAMP GENSQLTLSD 540 NDVNSTEKMP LEVSNTRNDI IEPDSLHKQA TSGSRRHEKK RSTAEKNVSL SVLQQYFSGS 600 LKDAAKSIGV CPTTLKRICR QHGISRWPSR KINKVNRSLR KIQTVLDSVQ GVEGGLKFDP 660 NTREFMAAGS IIQETVSQKS LFPDKNLCVK NAELATQNAV SVPSAPGFDG MSSLIKLEED 720 DCSMGLNQVA PSMGKLNTNT CGEELRKSNA VPCQQASLET TSQASPESVS LGSYLVNRGE 780 KYSLNMDSLK LENDCHFVSL SLLAAGDDID TVIDVDDGIV EHNQPSSSGM TDSSNGSSSM 840 MRGSSSSSQS FEEQKYSKVK TSCVDSGSKI IVKATYREDT IRFKFEPSAG CFQLYEEVGK 900 RFKLQNGTFQ LKYLDDEEEW VMLVSDSDLQ ECLEILDDIG TRSVKLLVRD MPCSMNSSGS 960 SNCFLTGGL

Sequence ? help Back to Top

Protein Sequence Length: 969 aa Download sequence

MDYPLSPKEK GTGFWQSPRP QLENSVSFEV TRSLNLEDSL SDLMNFDTDA GWYNSPSATD  60
QILTSYGLSS FPSTPYGVSS DALNFSEQNG VAFPVNEVGG TFNPVGNSFN CGDKLMFDQM  120
DSQYGFSTDS NDANGLATAQ NNCSFPQNSV FDMGNCMIPR PLSMSVDEKM LKALSLFKAS  180
SGGGILAQVW VPMRLGDQHI LSTWEQPYLL DEMLAGYREI SRSFVFPTER RSGSFLGLPG  240
RVFISKVPEW TSNVSYYNKV EYLRADHAAQ HEVRGSIAVP VFDSPEMSCC AVLELVTTKE  300
KSNFNAELET VCNALQAVKL RTTEPPRLRP QCLSKNQRAA LAEIIDVLRA VCHAHRLPLA  360
LTWIPCYYTE GSGDEMPRVR VREGNTNSNE KCILCIEETA CYVNDRTMEG FVYACLEHHL  420
EEGQGIAGKA LQSNHPFFYA DVKNYDISEY PLVHHARKFG LNAAVSIRLR STYTGEDDYI  480
LELFLPVNMK GSAEQQLLLN NLSGTMQRIC KSLRTVSDAE NQNFPLMAMP GENSQLTLSD  540
NDVNSTEKMP LEVSNTRNDI IEPDSLHKQA TSGSRRHEKK RSTAEKNVSL SVLQQYFSGS  600
LKDAAKSIGV CPTTLKRICR QHGISRWPSR KINKVNRSLR KIQTVLDSVQ GVEGGLKFDP  660
NTREFMAAGS IIQETVSQKS LFPDKNLCVK NAELATQNAV SVPSAPGFDG MSSLIKLEED  720
DCSMGLNQVA PSMGKLNTNT CGEELRKSNA VPCQQASLET TSQASPESVS LGSYLVNRGE  780
KYSLNMDSLK LENDCHFVSL SLLAAGDDID TVIDVDDGIV EHNQPSSSGM TDSSNGSSSM  840
MRGSSSSSQS FEEQKYSKVK TSCVDSGSKI IVKATYREDT IRFKFEPSAG CFQLYEEVGK  900
RFKLQNGTFQ LKYLDDEEEW VMLVSDSDLQ ECLEILDDIG TRSVKLLVRD MPCSMNSSGS  960
SNCFLTGGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein