PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923049.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 159aa    MW: 17633.6 Da    PI: 10.7645
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.63.1e-172154134
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                    C+ C+ttkTplWR gp g+k+LCnaCG++ rk++
  XP_023923049.1 21 CTVCKTTKTPLWRGGPAGPKSLCNACGIRDRKRR 54
                    9******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MMDLSEKESL SMDVIEDMKC CTVCKTTKTP LWRGGPAGPK SLCNACGIRD RKRRNSMMGL  60
SHVSYRKKYR SNARATTTTT KSNSNVTTTT TTTAKAVGNG GKNLRESLKT KLMALGNDFL  120
LQRLPSVMKK QRCQRRRKLK EEEQAAVCLM ALSCGSVFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.16e-17GATA family protein