PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923147.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family LFY
Protein Properties Length: 245aa    MW: 27540.8 Da    PI: 8.5861
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY431.11e-1314231147386
         FLO_LFY 147 eglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgev 241
                      glseepvq+ekea+gsgg+g  ++e+va         ++k+    ++rk +++++  +++d+e   d+d++ +g+ g+erqrehPfivtepgev
  XP_023923147.1   4 TGLSEEPVQQEKEAVGSGGGG--TWEAVAGGG------RRKQ----RRRKGQRKVVDVDHDDNELGADHDDDMNGNVGSERQREHPFIVTEPGEV 86 
                     69***************9999..999999873......2333....2333333434445566667778888889999****************** PP

         FLO_LFY 242 argkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGaw 336
                     argkknGLDYLf+LyeqCr+fL+qvq+iakerGekcPtkvtnqvfr+akkagasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGaw
  XP_023923147.1  87 ARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRGFKERGENVGAW 181
                     *********************************************************************************************** PP

         FLO_LFY 337 rqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
                     rqacy+plvaiaarqgwdida+fnahprLs+WYvPtkLrqLCh+er++a+
  XP_023923147.1 182 RQACYNPLVAIAARQGWDIDAIFNAHPRLSVWYVPTKLRQLCHAERNHAT 231
                     **********************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MAWTGLSEEP VQQEKEAVGS GGGGTWEAVA GGGRRKQRRR KGQRKVVDVD HDDNELGADH  60
DDDMNGNVGS ERQREHPFIV TEPGEVARGK KNGLDYLFHL YEQCRDFLIQ VQNIAKERGE  120
KCPTKVTNQV FRFAKKAGAS YINKPKMRHY VHCYALHCLD EEASNALRRG FKERGENVGA  180
WRQACYNPLV AIAARQGWDI DAIFNAHPRL SVWYVPTKLR QLCHAERNHA TASSSVSGGA  240
DHMPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13441RRKQRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-114LFY family protein