PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023923169.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 304aa MW: 34148 Da PI: 8.1275

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023923169.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.2	3.5e-14	97	148	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ XP_023923169.1 97 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 148 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MALEALSSSE LFNFIIYDTI SATPYDNHEN SFLLENGMTT PQDHQGSPLK NSSSMTRKRH 60 PGSSESVERK QNLGVQGIKK RRRKPRVCKN KEEAETQRMT HIAVERNRRK QMNEHLAVLR 120 SLMPESYVQR GDQASIVGGA IEFVKELEHL LQTLEAQKLQ ILQPAGGGGL NVNEDTTGTA 180 SKFMPPPFAQ FFAYPQYTWS QIPNKYTSKT LAAIADIEVT LIETHANLRI LWRKSPRQLS 240 KLVAGFQTLH LTILHLNVAT MDPLVLYSIS AKVEEACQLT SVDDIAAAVH HMLRIIEEEA 300 TLCN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	84	KKRRRK
2	98	109	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-71	bHLH family protein