PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023923248.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 216aa MW: 24703.9 Da PI: 8.8194

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023923248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.3e-18	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l d ++ +G+g W++Ia++ g++R++k+c++rw +yl XP_023923248.1 9 KGPWTVEEDRILMDHIRVHGKGKWNRIAKMTGLKRCGKSCRLRWINYL 56 79********************************************97 PP
2	Myb_DNA-binding	59.5	7.2e-19	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++++++lG++ W++Ia +++ gRt++q+k++w+++l XP_023923248.1 62 RGDFSEEEEDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 107 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MESKNEHRKG PWTVEEDRIL MDHIRVHGKG KWNRIAKMTG LKRCGKSCRL RWINYLSPGV 60 KRGDFSEEEE DLIIRLHNLL GNRWSLIAGR VPGRTDNQVK NHWNTHLCKK LGIKKGKTKV 120 GSSLQSFSTK RGNNPTSVSS EPNFEPPSNC NSETEAKTAT EGDSQSMCKF ASTQEATTED 180 NYERSFWLSK DDLNLLTPFL LEPLNSYSLD FVWDCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	1e-64	MYB family protein