PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023923292.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 531aa MW: 58273.7 Da PI: 4.6089

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023923292.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113	2e-35	47	138	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++ ++sws ++nsfvv+++ efa+++LpkyFkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_023923292.1 47 FLSKTYDMVDDPATDPILSWSPTNNSFVVWNPPEFARDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKN 132 9******************999*************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_023923292.1 133 ISRRKP 138 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MESAVTTEGD SAASSGGGGG SGGGGGGEQQ QQQAPAPMPS GTGPPPFLSK TYDMVDDPAT 60 DPILSWSPTN NSFVVWNPPE FARDLLPKYF KHSNFSSFVR QLNTYGFRKV DPDRWEFANE 120 GFLRGQKHLL KNISRRKPTH GHSQQQPQQS HGQNSSVGAC VEVGKFGLEE EVERLKRDKN 180 VLMQELVRLR QQQQTTDNQL QTMVQRLQGM EQRQQQMMSF LAKAVQSPSF LAQFVQQQNE 240 SNRRITEANK KRRLKQEGIS ESEHSTTTSD GQIIKYRPQM NETMLRQIMK MDANSRLEPF 300 KNNDSLLIAD GSSSSDAMDA GSSPSRISGV RLQEVAPMTG QSSYMPSSSR VAPRVSGNGP 360 SAATSEIQSS PRAVTSDKVT TPFPDMSVLV GAQDAPSISI PEADVIMPEL SQIPEMMPGS 420 IVDIPEQTYV GLETGKSGFL DPTSLEVNGP IPIDIDNISP DPDIDALLDN SDFWDNFLVQ 480 SPVPEDIELN SADGLSKENE AQPDENGWEK SQHVDKLTEQ MGLLTSDTKR V

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MESAVTTEGD SAASSGGGGG SGGGGGGEQQ QQQAPAPMPS GTGPPPFLSK TYDMVDDPAT  60
DPILSWSPTN NSFVVWNPPE FARDLLPKYF KHSNFSSFVR QLNTYGFRKV DPDRWEFANE  120
GFLRGQKHLL KNISRRKPTH GHSQQQPQQS HGQNSSVGAC VEVGKFGLEE EVERLKRDKN  180
VLMQELVRLR QQQQTTDNQL QTMVQRLQGM EQRQQQMMSF LAKAVQSPSF LAQFVQQQNE  240
SNRRITEANK KRRLKQEGIS ESEHSTTTSD GQIIKYRPQM NETMLRQIMK MDANSRLEPF  300
KNNDSLLIAD GSSSSDAMDA GSSPSRISGV RLQEVAPMTG QSSYMPSSSR VAPRVSGNGP  360
SAATSEIQSS PRAVTSDKVT TPFPDMSVLV GAQDAPSISI PEADVIMPEL SQIPEMMPGS  420
IVDIPEQTYV GLETGKSGFL DPTSLEVNGP IPIDIDNISP DPDIDALLDN SDFWDNFLVQ  480
SPVPEDIELN SADGLSKENE AQPDENGWEK SQHVDKLTEQ MGLLTSDTKR V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	249	256	NKKRRLKQ
2	250	255	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17750.1	1e-116	HSF family protein